BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H05SP1|AL428801
(944 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1369 1531 0.0
>3x_Contig1369
Length = 7461
Score = 1531 bits (771), Expect = 0.0
Identities = 798/807 (98%), Gaps = 1/807 (0%)
Strand = Plus / Plus
Query: 1 gatcttgaattggaattggaacaagctctacaaacagaaactactgatggttctataccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1547 gatcttgaattggaattggaacaagctctacaaacagaaactactgatggttctataccg 1606
Query: 61 gcaagcatggttaatggaccggctggagcagcgatgtctacagatactggcagtgttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1607 gcaagcatggttaatggaccggctggagcagcgatgtctacagatactggcagtgttgta 1666
Query: 121 agaccaggacaacttcttgaggagaccggtgatgacgttgaacaagataacggtgatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 agaccaggacaacttcttgaggagaccggtgatgacgttgaacaagataacggtgatgat 1726
Query: 181 gaagacgaagaggaggaggacgaagaggaagaagaggaggaagaagaggatgaagaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 gaagacgaagaggaggaggacgaagaggaagaagaggaggaagaagaggatgaagaagag 1786
Query: 241 gaggatgaagagaacggtgctgatggattatccggatcagttacaacaggaacaactaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 gaggatgaagagaacggtgctgatggattatccggatcagttacaacaggaacaactaag 1846
Query: 301 tcacgtgtctcagacaacgatggtgctaacgaagaagagcaacacagagaattattactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1847 tcacgtgtctcagacaacgatggtgctaacgaagaagagcaacacagagaattattactt 1906
Query: 361 gatgaattgagggaactagaaagtacgttagaattaaaccggaataaagccagtaggact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907 gatgaattgagggaactagaaagtacgttagaattaaaccggaataaagccagtaggact 1966
Query: 421 acgaatccgttgttaaagacaagattcttagaaagtatcaagaagcttgagaaagaagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1967 acgaatccgttgttaaagacaagattcttagaaagtatcaagaagcttgagaaagaagtt 2026
Query: 481 gaattgaaacgaaaacagttaggagaaccagttgttgtagacgatgcaggaaatgtacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 gaattgaaacgaaaacagttaggagaaccagttgttgtagacgatgcaggaaatgtacag 2086
Query: 541 acagctcaagacatctcagawaacgtacccgatactgaagccggtgcagtatcgaacaag 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2087 acagctcaagacatctcagaaaacgtacccgatactgaagccggtgcagtatcgaacaag 2146
Query: 601 gccgcaatcagaaatggcagcgttagtagcggtggtagtggcgtaaccggatcggcatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2147 gccgcaatcagaaatggcagcgttagtagcggtggtagtggcgtaaccggatcggcatca 2206
Query: 661 attccaaacaatgctacgattaccaatggagtggaaaacattggtaccgaaggaaatctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2207 attccaaacaatgctacgattaccaatggagtggaaaacattggtaccgaagg-aatctt 2265
Query: 721 tatgaggaggaggatgaactagaagawgaggaagaagaggaggaggaggaagaggaggga 780
|||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| |
Sbjct: 2266 tatgaggaggaggatgaactagaagaagaggaagaagaggaggagggagaagaagaggaa 2325
Query: 781 gaagaagaggaagaagaagaggaagag 807
|||||||||||||| ||| ||||||||
Sbjct: 2326 gaagaagaggaagaggaacaggaagag 2352
Score = 349 bits (176), Expect = 5e-96
Identities = 188/192 (97%)
Strand = Plus / Plus
Query: 753 agaagaggaggaggaggaagaggagggagaagaagaggaagaagaagaggaagaggaaca 812
|||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2286 agaagaagaggaagaagaggaggagggagaagaagaggaagaagaagaggaagaggaaca 2345
Query: 813 ggaagagcaacggccggacgaagaaccgcaacaaggacaagaagcaagacaaggtactga 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2346 ggaagagcaacggccggacgaagaaccgcaacaaggacaagaagcaagacaaggtactga 2405
Query: 873 agaacttgatcaagatgacatggatatgatgcttcttttcggagcggataacgattaggt 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2406 agaacttgatcaagatgacatggatatgatgcttcttttcggagcggataacgattaggt 2465
Query: 933 ttgaactgagag 944
||||||||||||
Sbjct: 2466 ttgaactgagag 2477
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,262
Number of Sequences: 1807
Number of extensions: 10262
Number of successful extensions: 739
Number of sequences better than 1.0e-20: 1
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)